Chromatin Binding of Gcn5 in Drosophila is Largely Mediated by CP190
Nucleic Acid Research • 2016
Publication Information
Authors
Ali, Tamer; Krüger, Marcus; Bhuju, Sabin; Jarek, Michael; Bartkuhn, Marek; Renkawitz, Rainer
Keywords
CP190, Gcn5, dCas9, RNA-Seq, ChIP-Seq
Journal
Nucleic Acid Research
Publisher
Not Available
Volume
in press
Issue
Not Available
Pages
Not Available
publication.type
International
Paper Link
Not Available
Supplementary Materials
Not Available
Abstract
Centrosomal 190 kDa protein (CP190) is a promoter binding factor, mediates long-range interactions in the context of enhancer-promoter contacts and in chromosomal domain formation. All Drosophila insulator proteins bind CP190 suggesting a crucial role in insulator function. CP190 has major effects on chromatin, such as depletion of nucleosomes, high nucleosomal turnover and prevention of heterochromatin expansion. Here we searched for enzymes, which might be involved in CP190 mediated chromatin changes. 80% of the genomic binding sites of the histone acetyltransferase Gcn5 are colocalizing with CP190 binding. Depletion of CP190 reduces the number of Gcn5 binding sites and binding to chromatin. Binding dependency was further supported by Gcn5 mediated co-precipitation of CP190. Gcn5 is known to activate transcription by histone acetylation. We used the dCas9 system to target CP190 or Gcn5 to a Polycomb repressed and H3K27me3 marked gene locus. Both, CP190 as well as Gcn5, activate this locus, thus supporting the model that CP190 recruits Gcn5 and thereby activates chromatin.
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