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Novel Assemblies Based on Oligonucleotides Containing Intercalating Nucleic Acid Monomers, Nucleosides, Nucleotides & Nucleic Acids, (2020), 39 (1-3), 82-96.

Nucleosides, Nucleotides & Nucleic Acids • 2020
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Publication Information
Authors Asmaa Abdelrahman, Alaa S. Gouda, Per T. Jørgensen and Jesper Wengel
Keywords DNA; pyrene; naphthalene; pi-interactions; supramolecule
Journal Nucleosides, Nucleotides & Nucleic Acids
Publisher Taylor & Francis Group, LLC
Volume 39
Issue 1-3
Pages 82-96
publication.type International
Paper Link Open Link
Supplementary Materials Not Available
Abstract
This is the first report exploring the capability of twisted intercalating nucleic acid (TINA) and naphthalene functionalized non-nucleosidic linkers to stabilize and engage in double-helical structures. Four designs were studied with respect to the formation of duplexes and/or other types of self-assemblies. One of the constructs involving TINA provides a thermostable duplex.The biophysical properties of the individual constructs were investigated by UV thermal melting experiments, circular dichroism, and fluorescence emission spectroscopy. Molecular modeling studies were performed in attempts of explaining the biophysical measurements for the duplex based on the TINA-containing oligonucleotide strands.