Novel Assemblies Based on Oligonucleotides Containing Intercalating Nucleic Acid Monomers, Nucleosides, Nucleotides & Nucleic Acids, (2020), 39 (1-3), 82-96.
Nucleosides, Nucleotides & Nucleic Acids • 2020
Publication Information
Authors
Asmaa Abdelrahman, Alaa S. Gouda, Per T. Jørgensen and Jesper Wengel
Keywords
DNA; pyrene; naphthalene; pi-interactions; supramolecule
Journal
Nucleosides, Nucleotides & Nucleic Acids
Publisher
Taylor & Francis Group, LLC
Volume
39
Issue
1-3
Pages
82-96
publication.type
International
Paper Link
Open Link
Supplementary Materials
Not Available
Abstract
This is the first report exploring the capability of twisted intercalating nucleic acid (TINA) and naphthalene functionalized non-nucleosidic linkers to stabilize and engage in double-helical structures. Four designs were studied with respect to the formation of duplexes and/or other types of self-assemblies. One of the constructs involving TINA provides a thermostable duplex.The biophysical properties of the individual constructs were investigated by UV thermal melting experiments, circular dichroism, and fluorescence emission spectroscopy. Molecular modeling studies were performed in attempts of explaining the biophysical measurements for the duplex based on the TINA-containing oligonucleotide strands.
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